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protein Data Base

× Info! Tap on one of the database below to read more about the database being searched. It contains the name of the database, the type of the database, and a link to the official website.

A protein database is a collection of data that has been constructed from physical, chemical and biological information on sequence, domain structure, function, three dimensional structure and protein-protein interactions(Cho, Park et al. 2002). The purpose of the protein database is to arrange and annotate protein structures, providing the biological community with valuable access to experimental evidence.(Berman 2008). According to published scientific databases such as ABCD db (Lima, Gasteiger et al. 2020),P3DB(Yao and Xu 2017) and SCOP db (Lo Conte, Ailey et al. 2000) is well known databases in protein research area. due to the rapid growth in Protein Databases, we have provided 538 modified databases that can be quickly indexed by clicking on the name of the database.

BioModels

AntoPDB

Phosphat

Genomeindia

CAZy

JET2 Viewer

RPFdb

TSTMP: Target Selection for human TransMembrane Proteins

Evolutionary Classification of Protein Domains

The ProteomeXchange

MetalPDB

SitEx

ProTeus DataBase

PROSITE

Knowledgebase of proteins involved in 3D domain swapping:

InParanoid: ortholog groups with inparalogs

LenVarDB

MyHits

SwissBioisostere database

PHmodels 3.0

PLMD

DNAproDB

PhaSepDB

PDB

SCOP db

OPM db

SMR db

3Dee db

ArchDB

ASTRAL db

BMR DB

EMDB

PMP db

Proteopedia db

MolMovDB

PDBsum db

PDBTM db

PDBePISA db

SBKB db

AutoPSI db

CATH db

CDD db

PDBe db

PDMS db

MiCroKiTS db

EuRBPDB

Thera SAbDab

MetaboLights db

NORINE db

AlloMAPS

AWESOME

MemProtMD

ActiveDriverDB

iPTMnet

PIT DB

AAgAtlas

TSTMP

Proteome Xchange

Human Integrated Protein Protein Interaction rEference

CSS Palm

dbPPT

Phospho.ELM

Viperdb

Voronoia

Target

SWISS MODEL

SUPERFAMILY

UCSF Chimera

Sting Report

Start2Fold

SCOPe

SCOP 2

AIFTS

EBI

RepeatsDB

PTGL

PSI

PSCDB

PGD

PCIDB

PoSSuM

PiSITE

PDBTM

PDBsum

PDBj

PDBFlex

PDBe

CMBI

PCDDB

OPM

NPIDB

ModBase

MMDB

MALISAM

LinkProt

JenaLib

Jail

IMGT

GNMDB

IDEAL

HOMSTRAD

Gene3d

Fpop

EMDataresource

Dominsdb

Dockground

3did

AutoPSI

BMRB

BSDB

CAPS

CATH V4.3

CC+DB

D2P2

FireDB

PDBSite

DomIns

PhyloFacts

ADPriboDB

CSDBase

KnotProt 2.0

LIPASE E db

Het PDB Navi

LOX DB

Polbase

SDAP

Telomerase DB

Proteome

HAMAP

Funcoup

SignalP 5.0 Server

jPOSTrepo (Japan ProteOme STandard Repository)

Uniclust

dbPTM

My Hits DataBase

UniSave

UniRef

UniParc

Prf Database

Aaindex Database

IPGDB

InterPro

O GlycBase v6.00

PhosphoSitePlus

Conserved Domains and Protein Classification

iPfam

MulPSSM

eggNOG

InParanoid

Protein Spotlight

Dialign

EPSD

dbPAF

PhosphoPep

PTMD 1.0

WALTZ DB

FoldamerDB

SwissPalm

DIP db

DisProt db

InterPro db

Mobi DB

nextprot db

Pfam

PRINTS

PROSITE db

PIR db

SUPERFAMILY db

UniProt DB

OWL db

COGs db

ProDom db

SMART db

COMBREX DB

PA DB

TCDB

ASC db

ELM db

HRaP db

AARSDB

ASPD DB

TransportDB 2.0

NPD db

Clustal Omega DB

MUSCLE DB

ABCD db

CMAUP

aBiofilm

AIRS

BAC

CHAMSE

DORRS

DVP

T R A N S I T

MnM 4.0

EVEREST

OMA DB

PANDIT

PANTHER

Pfam

Protein Clusters

ProtoNet

CyMoBase

Degradome Database

EROP Moscow

GPCR NaVa

Kinomer

Peptaibol

PeroxiBase

PREX

REBASE

RPG

ThYme

TopFIND

TransportDB

Translatome Database

HPA DB

PRIDE

PRIDE db

Proteinpedia db

TKDP db

PAXdb

THPA db

iProClass

sORFs

Next prot

GLYConnect

The Database of Differential Protein Protein Interactions in Human Tissues

BindingDB

CyBase

Pro Carb

PhaSepPro

DrLLPS

IBIS DB

DIMA db

STRING DB

ASD db

CSA db

EF hand CaBP db

ENZYME DB

Laminin DB

MatrixDB

MEROPS DB

PREX2 db

WNT db

O GlycBase

MoonDB

NBDB database

MobiDB

RBP Var

iUUCD

KIDFamMap

Binding MOAD

ComPPI

DIMA 3.0

DynamProt

Het PDB Navi2

HitPredict

HPID

IBIS

IMOTdb

Inter Chain Beta Sheets

InterEvol

Isobase

KUPS

ligasite

NCBI BioSystems

Negatome Database 2.0

PrePPI

ProtCID

Protein protein interfaces

PTMcode 2

SFLD

TissueNet

TRANSPATH®

TRIP

UniHI

SuperCYP

TRIP DB 2.0

UUCD

Wnt Database

KBDOCK

Rhea

RPISeq

AffinDB

BioLiP

ChEMBL

CIDeR

LLPSDB

PhaSePro db

ProCarbDB

WALTZ DB 2.0

EncoMPASS

ENPD

iProX

jPOSTdb

KinaMetrix

OpenProt

qPhos

Translocatome

Vesiclepedia

AAgMarker

AmyPro

anti CRISPRdb

ClusterCAD

dbCAN seq

EPD

LINCS Data Portal

OverGeneDB

STCRDab

SysteMHC Atlas

Tabloid Proteome

TranslatomeDB

ProteomicsDB

dbSAP

FuzDB

jPOSTrepo

Membranome

POSTAR

Proteome pI

ECOD

ENZYME

ADP ribosylation

Proteome Pi db

eggNOG 5.0

KEGG ENZYME db

DSSP

HSSP

PDBREPORT

PDB_REDO

PDBFINDER

AntiJen

APID

AS ALPS

ASD

CORUM

SNO

DEPOD

DIMA

DIPTM

E3NET

GenAge

gpDB

HAPPI

HINT

HPRD