Protein model databases is the protein three-dimensional structure on the base of predication from its amino acids or primary structure(Deng, Jia et al. 2018), which is the most important targets soughed by bioinformatics and theoretical chemistry(Sliwoski, Kothiwale et al. 2014). In addition, the Protein model is of great significance in the field of medicine, e.g. drug design, while in the field of biotechnology it is the development of novel enzymes (Khan, Ullah et al. 2016). So that we have collected 27 Protein model databases for easy search.